Showing posts with label natural selection. Show all posts
Showing posts with label natural selection. Show all posts

Thursday, October 31, 2013

Is there room for punctuated equilibrium and species selection in macroevolution?



Posted by Erik Svensson

Next week (Tuesday November 5, 2013 at 10.30) I want to discuss a classical question in macroevolution that was originally suggested by paleontologists Niles Eldredge and Stephen Jay Gould in 1973, but which has gained increased interested with the explosion of molecular phylogenetic information and improved comparative methods: punctuated equilbrium and species selection. A recent TREE-article take a critical look at the evidence, and it should hopefully be an interesting read and stimulate discussion.

The first TREE-article seems critical towards the prospects for punctuated equilibrium, so as a complement (optional reading) I also post a link to an empirical study on extant mammalian body size variation by Folmer Bokma, which is suggestive of punctuated equilbrium. Enjoy that too!

 

Is there room for punctuated equilibrium in macroevolution?








Thursday, January 31, 2013

Does sexual and natural selection operate against each other or in the same direction?

Posted by Erik Svensson

During last week's lab-meeting we talked a little about the relationship between natural and sexual selection, and to what extent these processes are opposed to each other vs. operate in the same direction and favours the same phenotypic trait values. Next week we will continue discussing this theme based on a recent article about sexual and natural selection in fruitflies (Drosophila melanogaster) in Current Biology. This article by Long, Agrawal and Rowe does also have some important implications for what kind of inferences that can be made to natural populations based on studies in laboratory settings, with a cautionary tale.

Time and place as usual: "Argumentet "(2nd floor, Ecology Building) at 10.30, Tuesday, February 5.

Below, you will find Abstract and link to the article.


The Effect of Sexual Selection on Offspring Fitness Depends on the Nature of Genetic Variation





Tuesday, July 17, 2012

Thoughts and reflections about the nature of selection from a NESCent-meeting in North Carolina










Posted by Erik Svensson

I just returned from a three-day working group meeting at "National Evolutionary Synthesis Centre" (NESCent) in Durham (North Carolina). The working group's topic is "Environmental and demographic determinants of natural selection", and there were 18 participants from the Australia, Canada, Sweden, the US and UK, i. e. a very multantional and scientifically diverse crowd, some of which you see on the pictures above and who you might recognize already. The organizers of this working group are Andrew MacColl, Adam Siepielski, Stephanie Carlson and Tim Coulson, four colleagues whose work I did know very well since before, but this was actually the first time we met IRL.

This working group will perform a meta-analysis and litterature synthesis on a favourite topic of mine: the ecological causes of natural and sexual selection on phenotypic traits in natural populations. I have been interested in this topic since my postdoc, especially the role of density-dependent natural selection on egg size, but also in later years when Tom Gosden and I studied spatial variation in sexual selection and its ecological consequences in the damselfly Ischnura elegans

 In spite of several decades of excellent selection studies in natural populations (summarized in a large meta-analysis ten years ago by Joel Kingsolver and colleagues), our knowledge about ecological agents (predators? competitors? parasites? climate?) are still very limited and far from quantitative. This is unfortunate, as natural selection is an ecological process, that might (or might not!) lead to evolutionary change. In fact, and to cite the great population geneticist Ronald Fisher in the famous opening sentence of his landmark volume The Genetical Theory of Natural Selection (published in 1930): "Natural selection is not evolution". Natural selection might lead to evolution - if the traits under selection are heritable and some other conditions are met - but need not to do so, and frequently does not.

Natural selection can for instance also reduce population size and cause extinction - and how often this is the case in nature we do not know. Nor is all evolutionary change due to natural selection - only extreme adaptationists would claim this. Much of evolutionary change can be due to - for instance - genetic drift, gene flow, recombination or simply neutral changes (for non-coding DNA). Thus, evolution and natural selection should not be confused - and one should not forget that one can study natural selection without any knowledge about genetics or the underlying genetic basis of traits under selection (Darwin is a good example of an evolutionist who knew more about natural selection than many molecular geneticists do today).

In this working group, we will search the litterature and add to already existing databases information about selective agents to those published studies where selection on phenotypic traits have been quantified already. Questions that can then be adressed include: How much of the variation in selection gradients can be explained by various environmental factors? What is the role of climatic factors and other abiotic factors vs. biotic factors like predation, competition, food supply or parasites? Do abiotic factors like climate and biotic factors interact - and could they even reinforce each other? We take up the challenge put forward by Michael Wade and Susan Kalisz in their important conceptual paper "The causes of natural selection" from 1990.

The questions are endless - and we know very little about the answers, but they are likely to be important. It is interesting that there is so much to do in this field and in the study of the ecology of selection in the "postgenomic" era, when we realize that the molecular revolution did not, and will not, solve all problems in evolutionary biology, and certainly not these ecological questions about the nature of selection on quantitative traits (whose genetic background is often due to many loci of small effects, resulting in the "missing heritability" problem).

The radical conclusion remains however: we do not need to know anything about neither quantative genetics or molecular genetics to study the ecological causes of selection - as this a question at an entirely different level of organization and  the ecological process of selection does not have anything to do with genetics, as so elegantly clarified and formalized by Lande and Arnold in their classical 1983-paper.

I am happy to have the opportunity to participate in a working group like this, and also impressed by a facility as NESCent - where synthetic work of this kind is funded - to the benefit of not only US scientists but also scientists from other countries. Hopefully, this working group will find some interesting new patterns and move the field forward - and perhaps help us to improve the empirical study of selection. I have already learned a lot - and hope to learn even more in the future. And that, after all, is the goal of science, not only publishing papers - which is of course also nice - but which is only one way of many others to communicate science. This blog post has hopefully also inspired and informed somewhat in that respect.

Saturday, September 25, 2010

Lab-meeting about selection, genetic drift and population divergence of a female mating polymorphism in diving beetles

This coming Wednesday (30 September 2010), we will discuss and give feedback on Tina Karlssons last manuscript: a study about population divergence of a female mating polymorphism in diving beetles and the relative role of genetic drift and selection. This paper is a study on three different species of diving beetles, all of which have the female mating polymorphism ("rough" and "smooth" females, respectively), but at various frequencies. Tina has studied population divergence in morph frequencies of these three species and compared with neutral molecular population divergence (AFLP-markers) to infer the relative roles of genetic drift, stabilizing selection and divergent selection in population divergence. This study is a follow-up study to the previous biomechanical study on male adhesion on these female morphs that we discussed at a  previous lab-meeting. 

Tina will send out this manuscript to interested participants on Monday. Please send her an e-mail (kristina.karlsson@zooekol.lu.se) if you have not received this manuscript by Monday and wish to participate in the discussion. Both positive and negative constructive feedback on this manuscript will be most welcome, as Tina will soon submit her thesis to the printer. The date of thesis defence will be Friday 26 November 2010, at 09.30, and the Faculty's opponent will be professor Nina Wedell from Exeter University (UK). 

Time and place for lab-meeting as usual: "Darwin" at 09.30, September 30 2010. Any fika-volunteer?

Sunday, May 16, 2010

Lab-meeting on adaption, extinction and GIS and field excursion next week

This coming week, I was thinking that we should discuss two interesting and general papers. The first one is an essay entitled Adaptation, extinction and plasticity in a changing environment, and it is published in the journal PLoS Biology. One of the authors is Russel Lande, one of the pioneers in developing statistical methods to study natural and sexual selection in natural populations. The current paper outlines a new research programme in how to apply these methods to study ongoing adaptation and evolutionary change in response to rapid environmental change, e. g. due to anthroprogenic global warming.

The second paper is published in Trends in Ecology & Evolution and it is entitled Integrating GIS-based environmental data in to evolutionary biology. One of the authors is John Wiens, who has used GIS extensively in some recent impressive and interesting studies on niche conservatism in salamanders and amphibians, some of which we have discussed in previous lab-meetings. The choice of this latter paper is motivated by the fact that Maren Wellenreuther and Keith Larson have done some interesting new analyzes using GIS that we might take a look at, depending on time and if Maren kan make it to the lab-meeting.

For Thursday (May 20), I was thinking that some of us should make a field trip to Klingavälsåns Naturreservat and other damselfly sites. Although spring is late, we could at least go out in the field and look at the sites and do some planning. We can decide about time and practical details on Wednesday.

Time and place for our regular lab-meeting:

Where: "Darwin-room", 2nd floor, Ecology Building
When: Wednesday, May 19, 10.15.

Any fika-volunteer?

Saturday, August 8, 2009

Lab-meeting on August 12: ecological or non-ecological speciation?













This coming Wednesday (12 August 2009), we will have our first lab-meeting for this semester. I suggest that we discuss this TREE-article by Rundell and Price about ecological and non-ecological speciation (and adaptive and non-adaptive speciation).

This article, as well as the second author's recent book Speciation in birds has been somewhat of an eye-opener, at least to me. Trevor Price's recent speciation-book might seem somewhat taxonomically narrow, since it only deals with birds. However, the book is a superb reading, also for those who work with other organisms (including insects!). Trevor makes a strong case for learning playing an important but under-appreciated role in the speciation process of birds, and backs up his claims by massive empirical data in a thorough review.

This was one of the major insights I got from reading his book during the summer, the other one was that I realized that the evidence for ecological speciation (and sympatric speciation, which is a sub-set of ecological speciation) is not that strong as one might think after reading Dolph Schluters equally excellent book The Ecology of Adaptive Radiation. In reality, many workers have in the recent past demonstrated ecological differences between closely related taxa, which is not the same thing as evidence for ecology playing a major role during the speciation process that formed the same taxa. Thus, the ecology of species differences is not the same thing as ecological speciation, just as the genetics of species differences is not the same thing as the genetics of speciation!

These subtle, but important issues, are dealt with in detail in Trevor's critical overview of the state-of-the-art of the speciation field. In practice, we might never be able to confidently state that a group of closely related species speciated because of ecological differences caused the reproductive isolation, particularly when the taxa are old and when it becomes difficult or impossible to infer ancestral character states (ecologies). Trevor makes a strong case in the article, and in his book, that many species of birds most probably did not speciate because of ecological factors, but rather because of geographical isolation during a prolonged period in allopatry. Ecological differences between species often emerged later, upon secondary contact in sympatry. He might be correct, although you will have to read the book and the article for yourself to decide where you stand on these issues.

Full reference and abstract to the article (in case the link above does not work):

Adaptive radiation, nonadaptive radiation, ecological speciation and nonecological speciation

Rundell, R.J.; Price, T.D.

Abstract

Radiations of ecologically and morphologically differentiated sympatric species can exhibit the pattern of a burst of diversification, which might be produced by ecological divergence between populations, together with the acquisition of reproductive isolation ('ecological speciation'). Here we suggest that this pattern could also arise if speciation precedes significant ecological differentiation (i.e. through geographical isolation and nonadaptive radiation). Subsequently, species ecologically differentiate and spread into sympatry. Alternative routes to producing ecologically differentiated sympatric species are difficult to detect in old radiations. However, nonadaptive radiations are common and might therefore regularly be responsible for currently ecologically differentiated sympatric species (e.g. among groups that are not susceptible to ecological speciation). Species evolving nonadaptively over long periods might eventually replace young, ecologically produced species.

Trends in Ecology & Evolution 24: 394-399

Time as usual: 10.00 on Wednesday (12 August) in "Darwin".

Any fika-volunteer?