Showing posts with label frequency-dependent selection. Show all posts
Showing posts with label frequency-dependent selection. Show all posts

Wednesday, November 5, 2014

Lab-meeting: negative frequency-dependent selection and a rock-paper-scissor game going on in Drosophila melanogaster?



Posted by Erik Svensson

Inspired by the recent media buss of our sexual selection study on Drosophila melanogaster, which got nice coverage in major media such as New York Times and Washington Post, I would like to dedicate the next lab-meeting other fascinating aspects of fruit flies and sexual selection. It is amazing that so much still remains to be known about this well-studied animal, isn't it?

This time we will discuss an interesting question: is there evidence of a rock-paper-scissor game in D. melanogaster, and if so does it maintain genetic variation?

The article we will discuss was published in Molecular Ecology, and you can find it here. There is also a nice and a brief commenting article by Adam Chippindale in the same issue, which you can find here.

For those of you who do not know what the rock-paper-scissor game is, it is a special form of negative frequency-dependent selection, where each genotype (or morph) has its own strength and weakness, and all morphs co-exist over evolutionary time, due to a particular fitness pay off structure. The first empirical example of a rock-paper-scissor game that was described was for the colour polymorphic side-blotched lizard (Uta stansburiana) in California, by Barry Sinervo. For years, many have thought this system was unique and perhaps not very representative, but the new fruit fly study might suggest otherwise.


 I hope you will enjoy these articles and the discussion. Abstract is found below. Time and place as usual:

When: Tuesday, November 11, at 10.30
Where: "Argumentet", 2nd floor, Ecology Building.

Welcome!

Natural genetic variation in male reproductive genes contributes to nontransitivity of sperm competitive ability in Drosophila melanogaster


  1. Rui Zhang,
  2. Andrew G. Clark and
  3. Anthony C. Fiumera
Abstract

Female Drosophila melanogaster frequently mate with multiple males, and the success of a given male depends not only on his genotype but also on the genotype of his competitor. Here, we assess how natural genetic variation affects male–male interactions for traits influencing pre- and postcopulatory sexual selection. Males from a set of 66 chromosome substitution lines were competed against each other in a ‘round-robin’ design, and paternity was scored using bulk genotyping. We observed significant effects of the genotype of the first male to mate, the second male to mate and an interaction between the males for measures of male mating rate and sperm utilization. We also identified specific combinations of males who show nontransitive patterns of reproductive success and engage in ‘rock-paper-scissors’ games. We then tested for associations between 245 polymorphisms in 32 candidate male reproductive genes and male reproductive success. We identified eight polymorphisms in six reproductive genes that associate with male reproductive success independent of the competitor (experimentwise P < 0.05). We also identified four SNPs in four different genes where the relative reproductive success of the alternative alleles changes depending on the competing males' genetic background (experimentwise P < 0.05); two of these associations include premature stop codons. This may be the first study that identifies the genes contributing to nontransitivity among males and further highlights that ‘rock-paper-scissors’ games could be an important evolutionary force maintaining genetic variation in natural populations.

Saturday, July 6, 2013

On elytral morphology, sexual conflict and female mating polymorphism in diving beetles: new paper in "Interface"


Posted by Erik Svensson

Forrmer PhD-student Kristina Karlsson-Green (currently postdoc in the "Metapopulation Research Group in Helsinkki, Finland) has published one of her last thesis-paper in the Royal Society Journal "Interface". This paper deals with a fascinating female mating polymorphism in diving beetles, where females have either a "rough" or "smooth" elytral morphology. She has quantified fine-scale female elytral morphology using scanning electron microscopy (SEM), as well as male morphological adaptations to clasp females during matings in the form of so-called "suction cups" (see picture above), and also used a biomechanical experiments to quantify male adhesion ability on the different female morphologies.

Results provide experimental support to the suggestion that this female mating polymorphism is maintained by sexually antagonistic and frequency-dependent selection caused by sexual conflict, and different male phenotypes show different ability to clasp the different female morphs. The experiments in this fascinating study were performed in collaboration with our colleague Prof. Stanislav N. Gorb, at Kiel University (Germany), and I personally like this combination of biomechanics and evolutionary biology very much. Below, you find a link and Abstract to the study.


Male clasping ability, female polymorphism and sexual conflict: fine-scale elytral morphology as a sexually antagonistic adaptation in female diving beetles

Friday, September 7, 2012

Talk on frequency-dependent selection by Yuma Takahashi


Posted by Erik Svensson

Next week's lab-meeting will take place in "Argumentet" (2nd floor, Ecology Building) on Tuesday September 11  at 10.30, i. e. usual time. This time, it will be our postdoc Yuma Takahashi from Japan who will give a short and informal talk about his past and ongoing research on colour polymorphisms and frequency-dependent selection in Ischnura-damselflies. As some of you already know, Yuma did his PhD-research on the damselfly species Ischnura senegalensis, a tropical counterpart to Ischnura elegans, who we have been working on in Sweden and Europe. You can read more about Yuma's research here, and find his publications here.

Do not miss this opportunity to listen to Yuma and his interesting research. I will bring some "fika".

Wednesday, December 7, 2011

Lab-meeting and some interesting evolutionary articles in Science



This week's lab-meeting will take place at an unusual time: Friday 9 December at 10.00 in "Argumentet". I hope you can make it, as Machteld and I will tell us a little bit about our impressions from the ASAB-meeting in London, where we recently participated. In addition, I would like to discuss two recent articles in Science which are of interest to evolutionary ecologists (and which are short reads). You will find more information about these papers below, including links and Abstracts.

First, there is this interesting study about negative frequency-dependent selection in voles: 


Negative Frequency-Dependent Selection of Sexually Antagonistic Alleles in Myodes glareolus

Abstract


Second, there is this study on individual face recognition in paper wasps: 

Specialized Face Learning Is Associated with Individual Recognition in Paper Wasps

Abstract

Monday, September 19, 2011

Beyond the Fst-Qst comparison: Insights from the EGRU-blog



You are probably aware of the fact that there are many problems of Fst-Qst-comparisons to infer selection, and this method is also known to have weak statistical power. Essentially, this means that even if selection acts on a phenotypic trait, this method might not be able to detect it, and a finding that Qst equals Fst does not mean that selection is not operating on the trait in question. This low statistical power is a problem, because if one finds a positive result, one can always say that selection has operated on the trait of interest, but not much can be said if one finds a negative result. The trait might then be "neutral" and not subject to selection - or it might be subject to selection, but we cannot detect it with the current method.

There might be solutions and alternatives to the Fst-Qst-comparisons, however. At Juha Merilä's research group blog "EGRU-blog", he refers to a recently published theory-paper in Genetics, which seems like an interesting read. Although I have not read this paper in detail, it is a paper worth keeping in mind, and worth returning to in the future. I took the liberty to borrow the picture from Juha's blog and some of the text where he explains the main implications of their study:

"The main point here to note is that this method allows detection of signatures of selection also in the case where Fst =Qst: the selection in these cases (c,d) is inferred from the fact that population centroids tend to cluster according to selective regime (color) rather than their ancestry (shape of the symbol). It is also worth pointing out that the new method accounts for many other technical problems that have plagued traditional Fst-Qst comparisons. Read the paper and become enlightened!"

To this, I would like to add that it is unlikely that we will ever find the molecular method that can replace the vastly superior method of directly measuring natural or selection in the wild, or quantify quantitative genetic patterns that reveal the action of past selection. Observing something directly, and trying to quantify it, will certainly always reveal more about agents of selection and mechanisms, than indirect inferences like the Fst-Qst comparison.

This does of course not mean that these indirect methods should never be used. Far from it, and we have used such methods in the past in thisthis and this study of ours, for example. But these methods can only be a first step, and if selection is inferred, it should only be considered as a preliminary working hypothesis, that needs to be experimentally corroborated. And moreover, some forms of selection, such as negative frequency-dependent selection, might seldom, or never be detectable when there is weak genetic differentiation between populations (precluding the prospects of finding a pattern where Qst < Fst), and in these cases, direct experimental field studies might be the only possible option. There is never an excuse to avoid going out the field or doing experiments in evolutionary biology, if it is possible.

Monday, September 21, 2009

Lab-meeting on the ecology of (incomplete) speciation




This Wednesday(September 23), I was thinking that we should discuss the issue of incomplete speciation and "speciation reversal", i. e. the opposite of speciation. There is a recent TREE-article by Patrik Nosil, Luke Harmon and Ole Seehausen that deals with this issue, and which can be found here.

Personally, I think that the issue of why speciation does not occur, is as important as why it occurs, and hopefully we will learn something new from this article. I think that our study systems (lizards, isopods, damselflies) are almost perfect in many respects to adress these kind of fascinating questions, so please study this article in depth.

Time and place as usual: the "Darwin"-room at 10.00 on Wednesday September 23. Any fika-volunteer?